Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015954469.1_cds_XP_016493324.1_83445
CDS Infomation

[gene=LOC107812685] [db_xref=GeneID:107812685] [protein=(-)-germacrene D synthase-like isoform X2] [protein_id=XP_016493324.1] [location=complement(join(16025..16318,17357..17605,18404..18542,19294..19666,20307..20589,20765..20866))] [gbkey=CDS]
Sequence

ATGGAGGTTAACAATATTGTTCATAAACCAACTCGTCGGTCTGTAGATTACCATCCAAGT
GTTTGGGGTGACTATTTCCTTGCATATGATTCTTCCCTTACGGAAATTTATCCTGATGAG
GAGCAAGAAGTTGAAGTGCTTAAAGAAGAGGTGAGGAAGATGCTAGTATCAGATCATGCT
GTATCCACACAAAAATTAGAGTTAATTGACATGATCCAACGACTGGGAGTATCGTATCAT
TTTGAAAACGAAATTGAGGAATCACTTAAACACATCTACAACAGCTGCAGTGAATTTGAT
GATAATGATGAGGACCATAATATGCTTGAGACACTTGCTCTTCGATTTCGATTGCTAAGA
CAAGCCGGATATAACGTCCCATGCGATGTCTTGGAAGAATTTATGGACGACGAAGGAAAA
TTCAAGGAAGTATTGGTAAGTGATGTGAAGGGAATTTTGAGCTTGTATGAAGCAGCACAT
GTTGGGGTTAAAGGAGAGAATATTTTAGAAGAAGCATTAGCTTTCACTACAACTCGACTT
AAATCTGTGGTACCTAACTTGAGTGGTCTCCTTTTAGCACAAGTAGCTCATGCCTTAAAG
ATGCCAATTCAAAGAACATTAGAAAGAGTAGCAGCAAGGCAATACATAAATATCTATAAA
GACAGTCCTAAGCATAATGAATTGCTACTACGATTCGCACGACTTGATTTCAACATGTTG
CAAAAGGTACATCAGAAAGAGCTATGTGGTATTACAAGATGGGACATAAATGCATCAAAG
CAGCTACCTCCATATTTGAAGCTCCTATACCATTATATTCTTGATGCTTTCGCTGAAATG
GAAGAGTTGTTGGCAAATGAAAACAAATCCTACCGAATTCACTATGCAAAAGTAGAGCTG
AAGAAAGTGTGTAAAGCATATTATCAAGAGTTCAAGTGGTATGATGCTGGATATATACCA
ACATTTGAGGAGTATTTGAAAGTGGCACTGGTAACTGCATGCCATATGTTGCTCTCCACA
ATTTCTTTGGTTGGTATGGGAGAAATTGTCACTAAGGAGAACTTTGATTGGATTACAAGT
GAACCTCTAATGGTAAAAGCTTCATCTATAGTATGTCGATTGATGGATGACAGAGTTGGA
CATCAGTTTGAACAAGAAAGAGGGCACGTAGCTTCAGCAGTTGAAAGTTACATGAAAGAG
TTTGGTGGTTCAAAGCAGGAAGCTTATGCCAAGTTTGAAAAACTTGTAGCAAATGGATGG
GAAGACGTAAATAAAGAATGCCTTTATTCTGTGCCTGCACCCCGGCCTATCCTCTTGCGA
GTACTCAATTTAACCCGTGTGATCAATCTCTTGTACAAGGATGAAGATTTATATACAAAC
TCCAAAACCAAGCTAAAGGATATCATTACCAAAGTATTAGTCGAACCATTTAAAACATAG

Peptide Sequence

PEP ID

XP_016493324.1
PEP Infomation

PREDICTED: (-)-germacrene D synthase-like isoform X2 [Nicotiana tabacum]
Sequence

MEVNNIVHKPTRRSVDYHPSVWGDYFLAYDSSLTEIYPDEEQEVEVLKEEVRKMLVSDHA
VSTQKLELIDMIQRLGVSYHFENEIEESLKHIYNSCSEFDDNDEDHNMLETLALRFRLLR
QAGYNVPCDVLEEFMDDEGKFKEVLVSDVKGILSLYEAAHVGVKGENILEEALAFTTTRL
KSVVPNLSGLLLAQVAHALKMPIQRTLERVAARQYINIYKDSPKHNELLLRFARLDFNML
QKVHQKELCGITRWDINASKQLPPYLKLLYHYILDAFAEMEELLANENKSYRIHYAKVEL
KKVCKAYYQEFKWYDAGYIPTFEEYLKVALVTACHMLLSTISLVGMGEIVTKENFDWITS
EPLMVKASSIVCRLMDDRVGHQFEQERGHVASAVESYMKEFGGSKQEAYAKFEKLVANGW
EDVNKECLYSVPAPRPILLRVLNLTRVINLLYKDEDLYTNSKTKLKDIITKVLVEPFKT

Transcript Sequence

Gene sequence data has not been registered.